BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F01SP1|AL427036
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1436 0.0
>3x_Contig1795
Length = 38452
Score = 1436 bits (722), Expect = 0.0
Identities = 758/773 (98%)
Strand = Plus / Minus
Query: 1 ccttacccttaccagtgacacggtcttcgatgatgataccaccttcaagcaccttggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9264 ccttacccttaccagtgacacggtcttcgatgatgataccaccttcaagcaccttggtct 9205
Query: 61 ttggcttttctttcttttcttccttcttttcttctttcttggttggtccttcttctaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9204 ttggcttttctttcttttcttccttcttttcttctttcttggttggtccttcttctaggt 9145
Query: 121 ctttcttgaattcaaccttcttttctttcttagccttcttgttctttttagtttcttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9144 ctttcttgaattcaaccttcttttctttcttagccttcttgttctttttagtttcttcaa 9085
Query: 181 ctagcttttgttcctcttcctcttcctcttcctcttcctcttcctcttctggttctggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9084 ctagcttttgttcctcttcctcttcctcttcctcttcctcttcctcttctggttctggtt 9025
Query: 241 gctttctcttgttgttcttcttagacttagattgttctttttcgacaagctcttggrtct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9024 gctttctcttgttgttcttcttagacttagattgttctttttcgacaagctcttggatct 8965
Query: 301 tagcttcaacgtcgctagcatcttctaactcttccagatcagcttcttcatccggggtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8964 tagcttcaacgtcgctagcatcttctaactcttccagatcagcttcttcatccggggtta 8905
Query: 361 gatagtcgtcttcatcttcatcgtagctttcatcgtcttcttcatcgtcatcttcgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8904 gatagtcgtcttcatcttcatcgtagctttcatcgtcttcttcatcgtcatcttcgtcat 8845
Query: 421 cgtaacctggtgcatcgaatgggtgcttgacatagttaccggttagagaaacncggtnng 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 8844 cgtaacctggtgcatcgaatgggtgcttgacatagttaccggttagagaaacacggtaag 8785
Query: 481 ngccagtnacaatgaattgarcttcttcttctggagcaattacsatatccaaagattgtt 540
||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 8784 aaccagtaacaatgaattgaacttcttcttctggagcaattacaatatccaaagattgtt 8725
Query: 541 gatattgagtctttggtgacaaagtcgctagggcgaattcttgggattcgtcatcggtgt 600
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 8724 gatattgagtctttggtgacaaagtcgctaggacgaattcttggaattcgtcatcggtgt 8665
Query: 601 caatttcgatgagttcttcatcgccttcatcttcatcttcctcttcctcttcctcttcct 660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8664 caatttcgataagttcttcatcgccttcatcttcatcttcctcttcctcttcctcttcct 8605
Query: 661 cttcttgcttcttgggcttaccctttccctttcccttcttagactttgacttttcctcct 720
||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 8604 cttcttgcttcttggacttacccttacccttacccttcttagactttgacttttcctcct 8545
Query: 721 cttcttcttcctcttcggaaatgtctaattcatcttcgtcgtaatcacccaac 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8544 cttcttcttcctcttcggaaatgtctaattcatcttcgtcgtaatcacccaac 8492
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,892
Number of Sequences: 1807
Number of extensions: 12892
Number of successful extensions: 672
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)